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Edited Books
Corne, D. W., Frisco P., Paun G., Rozenberg G., & Salomaa A. (2009).  Membrane Computing. International Workshop WMC9. Lecture Notes in Computer Science. IX+402. Abstract
Pérez-Jiménez, M. J., & Riscos-Núñez A. (2004).  Modelos de Computación Molecular, Celular y Cuántica . 262. Abstract
Paun, G., Rozenberg G., & Salomaa A. (2010).  The Oxford Handbook of Membrane Computing. Oxford University Press. xiv+664. Abstract
Milazzo, P., & Pérez-Jiménez M. J. (2010).  Proceedings First Workshop on Applications of Membrane Computing, Concurrency and Agent-based modelling in Population Biology . Electronic Proceedings in Theoretical Computer Science. 33,
Gheorghe, M., Hinze T., & Paun G. (2010).  Proceedings of the Eleventh International Conference on Membrane Computing. 482. Abstract
Pérez-Jiménez, M. J., Romero-Jiménez Á., & Sancho-Caparrini F. (2005).  Recent Results in Natural Computing. 311. Abstract
Paun, G., & Pérez-Jiménez M. J. (2006).  Selected papers devoted to Membrane Computing. Editorial.. Journal of Automata, Languages and Combinatorics. 11, 239.
Paun, G., Rozenberg G., Maurer H., & Karhumaki J. (2004).  Theory is Forever. Lecture Notes in Computer Science. 3113, X+283.
Calude, C., Dinneen M. J., Paun G., Pérez-Jiménez M. J., & Rozenberg G. (2005).  Unconventional Computation. Lecture Notes in Computer Science. 3699, XI+267.
Paun, G., Calude C., Dinneen M. J., Rozenberg G., & Stepney S. (2006).  Unconventional Computation. 5th International Conference, UC 2006 York, September 2006.. 4135, 267.
Journal Papers
Romero-Campero, F. J., & Pérez-Jiménez M. J. (2008).   A model of the Quorum Sensing System in Vibrio Fischeri using P systems . Artificial Life. 14(1), 95-109. Abstract
Gutiérrez-Naranjo, M. A., Pérez-Jiménez M. J., & Romero-Campero F. J. (2007).   A uniform solution to SAT using membrane creation. Theoretical Computer Science. 371(1-2), 54-61. Abstract
Freund, R., Kogler M., Paun G., & Pérez-Jiménez M. J. (2009).   Analele Universitatii din Bucuresti. Seria Informatica. Analele Universitatii din Bucuresti. Seria Informatica. 1-22.
Gheorghe, M., Manca V., & Romero-Campero F. J. (2011).   Deterministic and stochastic P systems for modelling cellular processes. Natural Computing. 9(2), 457-473. Abstract
Romero-Campero, F. J., & Pérez-Jiménez M. J. (2008).   Modelling gene expression control using P systems: The Lac Operon, a case study. Biosystems. 91(3), 438-457. Abstract
Ceterchi, R., & Pérez-Jiménez M. J. (2006).   On simulating a class of parallel architectures. International Journal of Foundations of Computer Science. 17(1), 91-110. Abstract
Peng, H., Wang J., & Pérez-Jiménez M. J. (2015).   Optimal multi-level thresholding with membrane computing. Digital Signal Processing. 37, 53–64.
Paun, G., & Pérez-Jiménez M. J. (2006).   Preface. Special Issue Membrane Computing. International Journal of Foundations of Computer Science. 17(1), 1-2.
Romero-Campero, F. J., Gheorghe M., Bianco L., Pescini D., Pérez-Jiménez M. J., & Ceterchi R. (2006).   Towards probabilistic model checking on P systems using PRISM. Lecture Notes in Computer Science. 4361, 477-495.
Obtulowicz, A., & Paun G. (2003).  (In search of) probabilistic P systems . Biosystems. 70(2), 107-121. Abstract
Gheorghe, M., Ipate F., Lefticaru R., Pérez-Jiménez M. J., Turcanu A., Valencia-Cabrera L., et al. (2013).  3-COL problem modelling using simple Kernel P systems. International Journal of Computer Mathematics. 90(4), 816-830. Abstract
Margenstern, M., Mitrana V., & Pérez-Jiménez M. J. (2005).  Accepting hybrid networks of evolutionary processors. Lecture Notes in Computer Science. 3384, 235-246. Abstract
Martínez-del-Amor, M. A., Pérez-Hurtado I., Orellana-Martín D., & Pérez-Jiménez M. J. (2020).  Adaptative parallel simulators for bioinspired computing models. Future Generation Computer Systems. 107, 469-484. Abstract
Zang, T., Lei J., Wei X., Huang T., Wang T., Pérez-Jiménez M. J., et al. (2019).  Adjacent Graph Based Vulnerability Assessment for Electrical Networks Considering Fault Adjacent Relationships Among Branches. IEEE Access. 7, 88927-88936. Abstract
Gheorghe, M., Martín-Vide C., Mitrana V., & Pérez-Jiménez M. J. (2003).  An agent based approach of collective foraging. Lecture Notes in Computer Science. 2686, 638-645. Abstract