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Pérez-Jiménez, M. J. (2014).  A bioinspired computing approach to model complex systems. Invited talk. 15th Conference on Membrane Computing, pre-proceedings. 11-14.
Calude, C., & Paun G. (2004).  Bio-Steps Beyond Turing. BioSystems. 77(1-3), 175-194. Abstract
Díaz-Pernil, D., Gutiérrez-Naranjo M. A., Molina-Abril H., & Real P. (2010).  A Bio-inspired Software for Segmenting Digital Images. (Atulya Nagar, R. Thamburaj, K. Li, Z. Tang, R. Li, Ed.).2010 IEEE Fifth International Conference on Bio-Inspired Computing: Theories and Applications BIC-TA. 2, 1377-1381 .
Colomer, A. M., Margalida A., Sanuy D., & Pérez-Jiménez M. J. (2011).  A bio-inspired computing model as a new tool for modeling ecosystems: The avian scavengers as a case study. Ecological Modelling. 222(1), 33-47 . Abstract
Paun, G. (2009).  A bibliography of spiking neural P systems . 7th Brainstorming Week on Membrane Computing. II, 207-212.
Valencia-Cabrera, L., Pérez-Jiménez M. J., Chen X., Wang B., & Zeng X. X. (2015).  Basic virus machines. 16th International Conference on Membrane Computing (CMC16). 323-342.
Ramírez-de-Arellano, A., Orellana-Martín D., & Pérez-Jiménez M. J. (2022).  Basic Arithmetic Calculations Through Virus-Based Machines. (Ferrández Vicente, José Manuel, Álvarez-Sánchez, José Ramón, de la Paz López, Félix, Adeli, Hojjat, Ed.).Bio-inspired Systems and Applications: from Robotics to Ambient Intelligence. 403–412. Abstract
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Gutiérrez-Naranjo, M. A., Pérez-Jiménez M. J., & Riscos-Núñez A. (2006).  Available membrane computing software. (Gabriel Ciobanu, Gheorghe Paun, Mario J. Pérez-Jiménez, Ed.).Applications of Membrane Computing. 411-436. Abstract
Zhang, G., Rong H., Ou Z., Pérez-Jiménez M. J., & Gheorghe M. (2014).  Automatic Design of Deterministic and Non-Halting Membrane Systems by Tuning Syntactical Ingredients. IEEE Transactions on NanoBioscience.
Peng, H., Wang J., Shi P., Pérez-Jiménez M. J., & Riscos-Núñez A. (2015).  An automatic clustering algorithm inspired by membrane computing. Pattern Recognition Letters. 68(1), 34-40.
Graciani-Díaz, C., & Pérez-Jiménez M. J. (2005).  Automated reasoning systems and molecular computing. (Mario J. Pérez-Jiménez, Álvaro Romero-Jiménez, Fernando Sancho-Caparrini, Ed.).Recent Results in Natural Computing. Abstract
Pérez-Jiménez, M. J., & Romero-Campero F. J. (2005).  Attacking the Common Algorithmic Problem by recognizer P systems. Lecture Notes in Computer Science. 3354, 304-315. Abstract
Cabarle, F. G. C., Adorna H. N., & Pérez-Jiménez M. J. (2015).  Asynchronous Spiking neural P systems with structural plasticity. Lecture Notes in Computer Science. 9252, 132-143.
Song, T., Pan L., & Paun G. (2012).  Asynchronous Spiking Neural P Systems with Local Synchronization. Tenth Brainstorming Week on Membrane Computing. II, 187-206. Abstract
Song, T., Pan L., & Paun G. (2013).  Asynchronous spiking neural P systems with local synchronization. Information Sciences. 219(10), 197-207. Abstract
Cavaliere, M., Egecioglu O., Ibarra O., Ionescu M., Paun G., & Woodworth S. (2009).  Asynchronous spiking neural P systems. Theoretical Computer Science. 410(24-25), 2352-2364.
Paun, G., Rozenberg G., & Jonoska N. (2004).  Aspects of Molecular Computing. XI+ 391.
Ceterchi, R., Mutyam M., Paun G., & Subramanian K. G. (2003).  Array-rewriting P systems . Natural Computing. 2(3), 229-249. Abstract
Christinal, H. A., Díaz-Pernil D., Gutiérrez-Naranjo M. A., & Pérez-Jiménez M. J. (2010).  Array Tissue-like P Systems. Eighth Brainstorming Week on Membrane Computing. 37-52.
Cordón-Franco, A., & Sancho-Caparrini F. (2005).  Approximating Non-discrete P Systems. Lecture Notes in Computer Science. 3365, 287-295. Abstract
Romero-Campero, F. J., & Krasnogor N. (2009).  An Approach to the Engineering of Cellular Models Based on P Systems. (Klaus Ambos-Spies, Benedikt Löwe, Wolfgang Merkle, Ed.).5th Conference on Computability in Europe, CiE 2009. 5635, 430-436. Abstract
Gutiérrez-Naranjo, M. A., Pérez-Jiménez M. J., Riscos-Núñez A., & Romero-Campero F. J. (2006).  An Approach to the degree of parallelism in P systems. (Carmen Graciani-Díaz, Gheorghe Paun, Álvaro Romero-Jiménez, Fernando Sancho-Caparrini, Ed.).Fourth Brainstorming Week on Membrane Computing . II, 87-104.
Pérez-Jiménez, M. J. (2005).  An Approach to Computational Complexity in Membrane Computing. Lecture Notes in Computer Science. 3365, 85-109. Abstract
Pérez-Jiménez, M. J. (2004).  An approach to computational complexity in Membrane Computing. Brainstorming Workshop on Uncertainty in Membrane Computing. 67-94.
Graciani-Díaz, C., Gutiérrez-Naranjo M. A., & Pérez-Jiménez M. J. (2009).  An approach to ballistic deposition based on Membrane Computing. International Journal of Unconventional Computing. 5(5), 427-439. Abstract