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Journal Papers
Valencia-Cabrera, L., Orellana-Martín D., Martínez-del-Amor M. A., Riscos-Núñez A., & Pérez-Jiménez M. J. (2016).  Polarizationless P Systems with Active Membranes: Computational Complexity Aspects. Journal of Automata, Languages and Combinatorics. 21(1-2), 107–123.
Pérez-Jiménez, M. J., Riscos-Núñez A., Rius-Font M., & Romero-Campero F. J. (2013).  A polynomial alternative to unbounded environment for tissue P systems with cell division. International Journal of Computer Mathematics. 90(4), 760-775. Abstract
Pérez-Jiménez, M. J., Romero-Jiménez Á., & Sancho-Caparrini F. (2006).  A Polynomial Complexity Class in P Systems Using Membrane Division. Journal of Automata, Languages and Combinatorics. 11(4), 423-434.
Colomer, A. M., Margalida A., & Pérez-Jiménez M. J. (2013).  Population Dynamics P System (PDP) models: a standarized protocol for describing and applying novel bio-inspired computing tools. Plos One. 4, 1-13. Abstract
Martínez-del-Amor, M. A., Pérez-Hurtado I., Gastalver-Rubio A., Elster A. C., & Pérez-Jiménez M. J. (2012).  Population Dynamics P Systems on CUDA. (Gilbert, David, Heiner, Monika, Ed.).Lecture Notes in Bioinformatics. 7605, 247-266. Abstract
Paun, G., & Paun A. (2002).  The power of communication: P systems with symport/antiport. New Generation Computing. 20(3), 295 - 305 . Abstract
Karhumaki, J., Paun G., Rozenberg G., & Salomaa A. (2011).  Preface. Fundamenta Informaticae. 110(1-4), 1.
Pan, L., Paun G., & Pérez-Jiménez M. J. (2015).  Preface. Fundamenta Informaticae. 136(3), i-i.
Gheorghe, M., Paun G., Pérez-Jiménez M. J., & Riscos-Núñez A. (2016).  Preface. Natural Computing. 15(4), 519-520.
Martínez-del-Amor, M. A., Riscos-Núñez A., & Valencia-Cabrera L. (2018).  Preface. Theoretical Computer Science. 724, 1-2.
Pan, L., Pérez-Jiménez M. J., & Zhang G. (2019).  Preface. Bio-inspired Computing: Theories and Applications. Fundamenta Informaticae. 164(2-3), i-ii.
Milazzo, P., & Pérez-Jiménez M. J. (2010).  Preface. Proceedings First Workshop on Applications of Membrane computing, Concurrency and Agent-based modelling in POPulation biology . Electronic Proceedings in Theoretical Computer Science. 33,
Bonizzoni, P., Paun G., Rozenberg G., & Zandron C. (2010).  Preface. Special issue on Models and Algorithms for Natural Processes honoring Professor Giancarlo Maur. Natural Computing. 9(2), 381-382.
García-Quismondo, M., Martínez-del-Amor M. A., & Pérez-Jiménez M. J. (2014).  Probabilistic Guarded P Systems, A New Formal Modelling Framework. Lecture Notes in Computer Science. 8961, 194-214. Abstract
Nepomuceno, Á., & Pérez-Jiménez M. J. (2012).  Programas Moleculares y Sistemas Lógico-formales. Theoretical Computer Science. 5, 77-89.
Cordón-Franco, A., Gutiérrez-Naranjo M. A., Pérez-Jiménez M. J., & Sancho-Caparrini F. (2004).  A Prolog simulator for deterministic P systems with active membranes. New Generation Computing. 22(4), 349-363 . Abstract
Orellana-Martín, D., Ramírez-de-Arellano A., Andreu-Guzmán J. A., Romero-Jiménez Á., & Pérez-Jiménez M. J. (2023).  A Protocol for Solutions to DP-Complete Problems through Tissue Membrane Systems. Mathematics. 11, 2797. Abstract
Macías-Ramos, L. F., Valencia-Cabrera L., Song B., Pan L., & Pérez-Jiménez M. J. (2015).  A P–Lingua Based Simulator for P Systems with Symport/Antiport Rules. Fundamenta Informaticae. 139(2), 211-277.
Gutiérrez-Naranjo, M. A., Alonso-Jiménez J. A., & Borrego-Díaz J. (2002).  A Quasi-Metric for Machine Learning. Lecture Notes in Computer Science. 2527, 193-203. Abstract
Paun, G. (2010).  A quick introduction to membrane computing. Journal of Logic and Algebraic Programming. 79(6), 291-294. Abstract
Paun, G. (2007).  A quick overview of membrane computing with details about spiking neural P systems. Frontiers of Computer Science in China. 1(1), 37-49. Abstract
Valencia-Cabrera, L., Orellana-Martín D., Martínez-del-Amor M. A., Riscos-Núñez A., & Pérez-Jiménez M. J. (2017).  Reaching efficiency through collaboration in membrane systems: dissolution, polarization and cooperation. Theoretical Computer Science. 701, 226-234.
Paun, G., & Pérez-Jiménez M. J. (2003).  Recent Computability Models Inspired from Biology: DNA and Membrane Computing. Theoria. 18(46), 71-84.
Paun, G., Pérez-Jiménez M. J., & Yokomori T. (2008).  Representations and characterizations of languages in Chomsky hierarchy by means of insertion-deletion systems. International Journal of Foundations of Computer Science. 19(4), 859-871. Abstract
Gheorghe, M., Paun G., Pérez-Jiménez M. J., & Rozenberg G. (2013).  Research frontiers in Membrane Computing: Open problems and research topics. International Journal of Foundations of Computer Science. 24(5), 547-557. Abstract